SpaCellAgent: A Self-Evolving LLM-Based Multi-Agent Framework for Trajectory Analysis

arXiv:2607.07467v1 Announce Type: new Abstract: Spatial and Single-cell transcriptomics are transformative in deciphering cellular dynamics. As the fundamental paradigm for reconstructing cell developmental paths, trajectory inference (TI) is critical. However, existing methods require extensive manual intervention and proficiency in heterogeneous tools, posing a significant barrier to efficient TI analysis. To bridge this gap, we propose SpaCellAgent, an autonomous large language model (LLM) mu...